Publications
A list of publications can also be found on pubmed and google scholar.
†Contributed Equally, *Corresponding Author
A list of publications can also be found on pubmed and google scholar.
†Contributed Equally, *Corresponding Author
A selection of highlights from our work
†Sarfatis, A., †Wang, Y., Twumasi-Ankrah, N., Moffitt, J.R.
Science, 387 eadr0932 (2025)
bioRxiv (2024)
†Cadinu, P., †Sivanathan, K.N., Misra, A., Xu, R.J., Mangani, D., Yang, E.,Rone, J.M., Tooley, K., Kye, Y., Bod, L., Geistlinger, L., Lee, T., Mertens, R.T., Ono, N., Wang, G., Sanmarco, L., Quintana, F.J., Anderson, A.C., Kuchroo, V.K., *Moffitt, J.R., *Nowarski, R.
Cell, 187 2010 (2024)
bioRxiv (2023)
Moffitt, J.R., Lundberg, E., Heyn, H.
Nature Reviews Genetics 23, 741 (2022)
Luce, J.J., Reardon-Lochbaum, C.A., Cadinu, P., Xu, R.J., Aceves-Salvador, J., Semizoglou, E., Wong, B., Lopez, I., Cantor, A.B., Renthal, W., Moffitt, J.R.
Scientific Reports, 15 32030 (2025)
bioRxiv (2025)
Lee, B., Kwon, J.-T., Jeong, Y., Caris, H., Oh, D., Feng, M., Mejia, I.D., Zhang, X., Ishikawa, T., Watson, B.R., Moffitt, J.R., Chung, K., Huh, J.R., Choi, G.B.
Cell, 188 P2190 (2025)
†Sarfatis, A., †Wang, Y., Twumasi-Ankrah, N., Moffitt, J.R.
Science, 387 eadr0932 (2025)
bioRxiv (2024)
Moffitt, J.R., Li, M., Nie, Q., Kanemaru, K., Teichmann, S.A., Dar, D., Kagohara, L.T., Itzkovitz, S., Vento-Tormo, R., Yanai, I., Fertig, E.J., Theis, F.J.
Cell Systems, 16 101200 (2025)
†Watson, B., †Paul, B., Rahman, R.U., Amir-Zilberstein, L., Segerstolpe, A.,Epstein, E.T., Murphy, S., Geistlinger, L., Lee, T., Shih, A., Deguine, J., Xavier, R.J., *Moffitt, J.R., *Mullen, A.
Nature Communications, 16 319 (2025)
bioRxiv (2024)
†Cadinu, P., †Yang, E., †Xu, R.J., Watson, B.R., Luce, J., Moffitt, J.R.
Current Protocols, 5 e70111 (2025)
Bhuiyan, S.A., Nagi, S.S., Sankaranarayanan, I., Semizoglou, E., et al., NIH PRECISION Human Pain Network
bioRxiv doi: https://doi.org/10.1101/2025.11.05.686654 (2025)
Xu, R.J., Cadinu, P., Nicol, P.B., Herrmann, U.S., Lee, T., Geistlinger, L., Irizarry, R.A., Moffitt, J.R.
bioRxiv doi: https://doi.org/10.1101/2025.07.21.665958v1 (2025)
*Eaton, D.S., Sanchez, C., Gutierrez-Lopez, L., Shenker, J.Q., Goulev, Y., Watson, B.R., Henriot, V., Garner, E.C., Justman, Q.A., *Moffitt, J.R., *Paulsson, J.
bioRxiv doi: https://doi.org/10.1101/2025.06.10.658525 (2025)
Yang, E., Aceves-Salvador, J., Castrillon, C., Herrmann, U.S., Akama-Garren, E.H., *Carroll, M.C., *Moffitt, J.R.
bioRxiv doi: https://doi.org/10.1101/2025.05.09.653118 (2025)
†Cadinu, P., †Sivanathan, K.N., Misra, A., Xu, R.J., Mangani, D., Yang, E.,Rone, J.M., Tooley, K., Kye, Y., Bod, L., Geistlinger, L., Lee, T., Mertens, R.T., Ono, N., Wang, G., Sanmarco, L., Quintana, F.J., Anderson, A.C., Kuchroo, V.K., *Moffitt, J.R., *Nowarski, R.
Cell, 187 2010 (2024)
bioRxiv (2023)
Wu, M., Zheng, W., Song, X., Bao, B., Wang, Y., Ramanan, D., Yang, D., Liu, R., Macbeth, J.C., Do, E.A., Andrade, W.A., Yang, T., Cho, H.S., Gazzaniga, F.S., Ilves, M., Coronado, D., Thomphson, C., Hang, S., Chiu, I.M, Moffitt, J.R., Hsiao, A., Mekalanos, J.J., Benoist, C., Kasper, D.L.
Cell, 187 897 (2024)
bioRxiv (2023)
Laubscher, E., Wang, X., Razin, N., Dougherty, T., Xu, R.J., Ombelets, L., Pao, E., Graf, W. Moffitt, J.R., Yue, Y., Van Valen, D.
Cell Systems, 15 P475 (2024)
bioRxiv (2023)
Nicol, P.B., Ma, R., Xu, R.J., Moffitt, J.R., Irizarry, R.A.
bioRxiv doi: https://doi.org/10.1101/2024.11.21.624653 (2024)
Bhattacherjee, A., Zhang, C., Watson,B., Djekidel, M.N., *Moffitt, J.R., *Zhang, Y.
Nature Neuroscience, 26 1880 (2023)
bioRxiv (2022)
Aw, E., Zhang, Y., Yalcin, E., Herrmann, U., Lin, S.L., Langston, K., Castrillion, C., Ma, M., Moffitt, J.R., Carroll, M.C.
Brain, Behavior, and Immunity, 114 511 (2023)
Choi, J., Li, J., Ferdous, S., Liang, Q., Moffitt, J.R., Chen, R.
Nature Communications 14 4929 (2023)
bioRxiv (2022)
Zhang, Y., Watson, B., Rattan, A., Lee, T., Chawla, S., Geistlinger, G., Guan, Y., Ma, M., Caldarone, B.J., Song, W., *Moffitt, J.R., *Carroll, M.C.
bioRxiv doi: https://doi.org/10.1101/2023.11.22.568325 (2023)
Moffitt, J.R., Lundberg, E., Heyn, H.
Nature Reviews Genetics 23, 741 (2022)
Petukhov, V., Xu, R.J., Soldatov, R.A., Cadinu, P., Khodosevich, K., Moffitt, J.R., Kharchenko, P.V.
Nature Biotechnology doi: https://doi.org/10.1038/s41587-021-01044-w (2021)
Wheeler, M.A., Clark, I.C., Tjon, E.C., Li, Z., Zandee, S.E.J., Couturier, C.P., Watson, B.R., Scalisi, G., Alkwai, S., Rothhammer, V., Rotem, A., Heyman, J.A., Thaploo, S., Sanmarco, L.M., Ragoussis, J., Weitz, D.A., Petrecca, K., Moffitt, J.R., Becher, B., Antel, J.P., Prat, A., Quintana, F.J.
Nature 578 593 (2020)
Kagan, J., Moritz, R., Mazurchuk, R., Lee, J.H., Kharchenko, P., Rozenblatt-Rosen, O., Ruppin, E., Edfors, F., Ginty, F., Goltsev, Y., Wells, J., LaCava, J., Rieseterer, J., Germain, R., Shi, T., Chee, M., Budnik, B., Yates, J., Chait, B., Moffitt, J.R., Smith, R., Srivastava, S.
Journal of Proteome Research 19 1900 (2020)
Wang, G., Ang C.-E., Fan, J., Wang, A., Moffitt, J.R., Zhuang, X.
bioRxiv doi: https://doi.org/10.1101/2020.12.07.414060 (2020)
Xia, C., Babcock, H., *Moffitt, J.R., *Zhuang, X.
Scientific Reports 9 7721 (2019)
bioRxiv (2018)